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Structure factors have been supplied for datablock(s) Rymmai_EKR_AP_2
THIS REPORT IS FOR GUIDANCE ONLY. IF USED AS PART OF A REVIEW PROCEDURE FOR PUBLICATION, IT SHOULD NOT REPLACE THE EXPERTISE OF AN EXPERIENCED CRYSTALLOGRAPHIC REFEREE.
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Structure factor report
Datablock: Rymmai_EKR_AP_2
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Bond precision:
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C-C = 0.0132 A
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Wavelength=0.71073
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Cell:
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a=32.828(3)
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b=11.6170(9)
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c=21.8691(18)
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alpha=90
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beta=130.509(3)
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gamma=90
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Temperature:
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100 K
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Calculated
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Reported
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Volume
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6341.0(10)
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6341.0(9)
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Space group
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C 2/c
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C 2/c
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Hall group
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-C 2yc
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-C 2yc
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Moiety formula
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2(C31 H28 N4 P Ru S), C H2 Cl2, 2(Cl), 2(H2 O)
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2(C31 H28 N4 P Ru S), C H2 Cl2, 2(Cl), 2(H2 O)
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Sum formula
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C63 H62 Cl4 N8 O2 P2 Ru2 S2
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C63 H62 Cl4 N8 O2 P2 Ru2 S2
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Mr
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1433.21
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1433.20
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Dx,g cm-3
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1.501
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1.501
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Z
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4
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4
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Mu (mm-1)
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0.811
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0.811
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F000
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2920.0
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2920.0
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F000'
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2914.82
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h,k,lmax
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44,15,29
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43,15,29
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Nref
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8089
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7964
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Tmin,Tmax
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0.848,0.900
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0.626,0.746
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Tmin'
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0.784
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Correction method= # Reported T Limits: Tmin=0.626 Tmax=0.746 AbsCorr = MULTI-SCAN
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Data completeness= 0.985
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Theta(max)= 28.566
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R(reflections)= 0.1221( 6433)
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wR2(reflections)= 0.2904( 7964)
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The following ALERTS were generated. Each ALERT has the format
test-name_ALERT_alert-type_alert-level.
Click on the hyperlinks for more details of the test.
Alert level C
PLAT082_ALERT_2_C High R1 Value .................................. 0.12 Report
PLAT084_ALERT_3_C High wR2 Value (i.e. > 0.25) ................... 0.29 Report
PLAT250_ALERT_2_C Large U3/U1 Ratio for <U(i,j)> Tensor(Resd 1) 2.2 Note
PLAT260_ALERT_2_C Large Average Ueq of Residue Including Cl2 0.152 Check
PLAT260_ALERT_2_C Large Average Ueq of Residue Including O1 0.114 Check
PLAT342_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.01321 Ang.
PLAT906_ALERT_3_C Large K Value in the Analysis of Variance ...... 13.543 Check
PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.600 18 Report
4 0 0, 14 2 0, 17 1 2, 18 4 3, 20 2 4, 17 7 5,
21 3 5, 6 2 6, 16 4 7, 6 2 10, 10 2 10, 14 2 10,
3 3 11, 0 4 13, 7 3 13, 10 2 14, 3 3 15, 7 3 15,
Alert level G
PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 6 Note
PLAT003_ALERT_2_G Number of Uiso or U(i,j) Restrained non-H-Atoms 19 Report
PLAT007_ALERT_5_G Number of Unrefined Donor-H Atoms .............. 6 Report
H1 H3A H4A H4B H1O H1P
PLAT083_ALERT_2_G SHELXL Second Parameter in WGHT Unusually Large 413.45 Why ?
PLAT128_ALERT_4_G Alternate Setting for Input Space-group C2/c I2/a Note
PLAT172_ALERT_4_G The CIF-Embedded .res File Contains DFIX Records 5 Report
PLAT177_ALERT_4_G The CIF-Embedded .res File Contains DELU Records 1 Report
PLAT186_ALERT_4_G The CIF-Embedded .res File Contains ISOR Records 1 Report
PLAT192_ALERT_3_G A Non-default DELU Restraint Value for First Par 0.0050 Report
PLAT299_ALERT_4_G Atom Site Occupancy Constrained at ............. 0.5 Check
C20 C20B C21 C21B C22 C22B C23 C23B
C24 C24B C25 C25B H21 H21B H22 H22B
H23 H23B H24 H24B H25 H25B Cl2 Cl3
C32 H32A H32B
PLAT301_ALERT_3_G Main Residue Disorder ..............(Resd 1) 16% Note
PLAT302_ALERT_4_G Anion/Solvent/Minor-Residue Disorder (Resd 2) 100% Note
PLAT304_ALERT_4_G Non-Integer Number of Atoms in ..... (Resd 2) 2.50 Check
PLAT480_ALERT_4_G Long H...A H-Bond Reported H21B ..CL1 . 2.88 Ang.
PLAT480_ALERT_4_G Long H...A H-Bond Reported H4A ..CL1 . 2.90 Ang.
PLAT484_ALERT_4_G Round D-H..A Angle Rep for C21B ..CL1 . 141 Degree
PLAT722_ALERT_1_G Angle Calc 111.00, Rep 112.10 Dev... 1.10 Degree
CL3 -C32 -H32A 1_555 1_555 1_555 # 179 Check
PLAT789_ALERT_4_G Atoms with Negative _atom_site_disorder_group # 5 Check
PLAT822_ALERT_4_G CIF-embedded .res Contains Negative PART Numbers 1 Check
PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 146 Note
PLAT870_ALERT_4_G ALERTS Related to Twinning Effects Suppressed .. ! Info
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 105 Note
PLAT933_ALERT_2_G Number of HKL-OMIT Records in Embedded .res File 18 Note
6 2 10, 3 3 11, 10 2 10, 3 3 15, 14 2 10, 14 2 0,
7 3 13, 21 3 5, 0 4 13, 6 2 6, 16 4 7, 17 1 2,
18 4 3, 7 3 15, 4 0 0, 17 7 5, 10 2 14, 20 2 4,
PLAT941_ALERT_3_G Average HKL Measurement Multiplicity ........... 3.8 Low
PLAT969_ALERT_5_G The 'Henn et al.' R-Factor-gap value ........... 5.854 Note
Predicted wR2: Based on SigI**2 4.96 or SHELX Weight 25.22 Note
0 ALERT level A = Most likely a serious problem - resolve or explain
0 ALERT level B = A potentially serious problem, consider carefully
10 ALERT level C = Check. Ensure it is not caused by an omission or oversight
31 ALERT level G = General information/check it is not something unexpected
1 ALERT type 1 CIF construction/syntax error, inconsistent or missing data
8 ALERT type 2 Indicator that the structure model may be wrong or deficient
10 ALERT type 3 Indicator that the structure quality may be low
20 ALERT type 4 Improvement, methodology, query or suggestion
2 ALERT type 5 Informative message, check
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Publication of your CIF
You should attempt to resolve as many as possible of the
alerts in all categories. Often the minor alerts point to easily fixed
oversights, errors and omissions in your CIF or refinement strategy, so
attention to these fine details can be worthwhile. In order to resolve some
of the more serious problems it may be necessary to carry out additional
measurements or structure refinements. However, the nature of your study may
justify the reported deviations from journal submission requirements
and the more serious of these should be commented upon in the discussion or experimental
section of a paper or in the "special_details" fields of the CIF.
checkCIF was carefully designed to identify outliers and unusual
parameters, but every test has its limitations and alerts that are not
important in a particular case may appear. Conversely, the absence of
alerts does not guarantee there are no aspects of the results needing
attention. It is up to the individual to critically assess their own
results and, if necessary, seek expert advice.
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PLATON version of 23/04/2026; check.def file version of 30/03/2026
| Datablock Rymmai_EKR_AP_2 - ellipsoid plot |
|
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